McDonnell Genome Institute

Washington University

Transcript

lnc-TPPP-2:3

Chromosome

chr5

Gene Name

lnc-TPPP-2

Start

599150

CPC Label

noncoding

End

612205

Cancer

BRCA-Luminal B

Strand

-

Peptide

LEIHSLAERPR

Modified Peptide

n[145]LEIHSLAERPR

Peptide Length

11

ORF Length

174

Open Reading Frame (ORF)

MLEIHSLAERPRLHSCGQWNSRHTHSHCHAQFTCAHAHSHSTLTVHTPHTHTYTGVRAHAHSRTHPPTHSLTPRFTPTHGPQSTGTCHTPTRGPPSHSKAFPHIPGRQEPSGQCRGMDEGQGGRWHEPPALHILLERKGGAGPPCPQLLGEAASGPGPAAPLLVSVPPLSIHKR

Conservation Score

0.335

PhyloCSF Frame 1

0

No. of Spectra

16

CPC Coding Probability

0.326323

PhyloCSF Frame 2 

0

CNTI Index

noncoding

Max Probability

0.9996

PhyloCSF Frame 3

0

CNTI Score

-0.281816888