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McDonnell Genome Institute
Washington University
Transcript
lnc-TPI1-1:1
Chromosome
chr12
Gene Name
lnc-TPI1-1
Start
6884897
CPC Label
noncoding
End
6885684
Cancer
BRCA-Luminal B
Strand
+
Peptide
EILVGDVGVTISEPFK
Modified Peptide
n[145]EILVGDVGVTISEPFK
Peptide Length
16
ORF Length
154
Open Reading Frame (ORF)
MRVRKCSTPEEIKKRTKAVIFLSQCRQKVHHVEGKEILVGDVGVTISEPFKHFVGMLPEKDCCYALYDASFETKESRRIDVFLWASELAPLKSKMIYTSSKDAIKKKFQGIKHEWQTNGPEDLNRACTAEKLGGSFFFFFEMDGSLIVAFEGCP
Conservation Score
1
PhyloCSF Frame 1
0
No. of Spectra
23
CPC Coding Probability
0.156902
PhyloCSF Frame 2
0
CNTI Index
coding
Max Probability
1
PhyloCSF Frame 3
0
CNTI Score
0.532003186
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