McDonnell Genome Institute

Washington University

Transcript

lnc-TP53TG3F-34:1

Chromosome

chr16

Gene Name

lnc-TP53TG3F-34

Start

35552908

CPC Label

noncoding

End

35554001

Cancer

HCC

Strand

+

Peptide

SISTMYWLDGVHSGGR

Modified Peptide

n[230]SISTM[147]YWLDGVHSGGR

Peptide Length

16

ORF Length

85

Open Reading Frame (ORF)

LKEAKKDKNIDAFIKSISTMYWLDGVHSGGRNTGVTYPQVLKEFAQTRIIVHTHGTLYQVCDLMRSCIGKEQNKFFRYLGILVCW

Conservation Score

1

PhyloCSF Frame 1

0

No. of Spectra

6

CPC Coding Probability

0.0836494

PhyloCSF Frame 2 

0

CNTI Index

coding

Max Probability

0.7885

PhyloCSF Frame 3

0

CNTI Score

0.635942215