McDonnell Genome Institute

Washington University

Transcript

lnc-TNRC6A-3:2

Chromosome

chr16

Gene Name

lnc-TNRC6A-3

Start

24539584

CPC Label

noncoding

End

24540284

Cancer

OV

Strand

+

Peptide

KCSEASPRPSAGFVSEAAAAAGGGGAGGGLR

Modified Peptide

n[145]KCSEASPRPSAGFVSEAAAAAGGGGAGGGLR

Peptide Length

31

ORF Length

50

Open Reading Frame (ORF)

LGPGVVRKCSEASPRPSAGFVSEAAAAAGGGGAGGGLREGLSSADRAFSA

Conservation Score

1

PhyloCSF Frame 1

2.059

No. of Spectra

1

CPC Coding Probability

0.00735688

PhyloCSF Frame 2 

3.793

CNTI Index

noncoding

Max Probability

0.9171

PhyloCSF Frame 3

1.543

CNTI Score

-0.293435213