The Maher Lab

McDonnell Genome Institute

Washington University

Transcript

lnc-TNPO3-5:1

Chromosome

chr7

Gene Name

lnc-TNPO3-5

Start

129117512

CPC Label

noncoding

End

129117827

Cancer

BRCA-Luminal B

Strand

-

Peptide

GITWGEDTLIEYLENPK

Modified Peptide

n[145]GITWGEDTLIEYLENPK

Peptide Length

17

ORF Length

73

Open Reading Frame (ORF)

MGDVEKSTNICVQKCAQCHTTEKGGKHKTEPNLHGLFGWKTGAIGFCYTDTSKNKGITWGEDTLIEYLENPKN

Conservation Score

1

PhyloCSF Frame 1

0

No. of Spectra

10

CPC Coding Probability

0.154543

PhyloCSF Frame 2 

0

CNTI Index

noncoding

Max Probability

0.9959

PhyloCSF Frame 3

0

CNTI Score

-0.395752122