top of page
McDonnell Genome Institute
Washington University
Transcript
lnc-TNPO1-2:1
Chromosome
chr5
Gene Name
lnc-TNPO1-2
Start
72599735
CPC Label
noncoding
End
72600773
Cancer
HCC
Strand
+
Peptide
LFLSWRSQPGTTTESLSSEGQR
Modified Peptide
n[230]LFLSWRSQPGTTTESLSSEGQR
Peptide Length
22
ORF Length
53
Open Reading Frame (ORF)
LQTWVACLSLGRLFLSWRSQPGTTTESLSSEGQRRRPPTGLLSPGARSRVRAT
Conservation Score
0.091
PhyloCSF Frame 1
-5.16
No. of Spectra
3
CPC Coding Probability
0.098319
PhyloCSF Frame 2
-4.007
CNTI Index
noncoding
Max Probability
0.0967
PhyloCSF Frame 3
-4.139
CNTI Score
-0.397612038
bottom of page