McDonnell Genome Institute

Washington University

Transcript

lnc-TNFRSF21-4:2

Chromosome

chr6

Gene Name

lnc-TNFRSF21-4

Start

47475413

CPC Label

noncoding

End

47477692

Cancer

OSCC

Strand

-

Peptide

AIIQSGGVLELR

Modified Peptide

n[145]AIIQSGGVLELR

Peptide Length

12

ORF Length

54

Open Reading Frame (ORF)

MLENLKENKLLWAKQAVKRRYELNESLGKAIIQSGGVLELRNGSGYANRVFLSL

Conservation Score

0.985

PhyloCSF Frame 1

-3.471

No. of Spectra

1

CPC Coding Probability

0.262219

PhyloCSF Frame 2 

-4.406

CNTI Index

noncoding

Max Probability

0.6102

PhyloCSF Frame 3

-4.876

CNTI Score

-0.366741087