The Maher Lab

McDonnell Genome Institute

Washington University

Transcript

lnc-TNFRSF13B-8:1

Chromosome

chr17

Gene Name

lnc-TNFRSF13B-8

Start

16843486

CPC Label

noncoding

End

16845599

Cancer

EOGC

Strand

-

Peptide

ADLEMHIENLKEELAYLK

Modified Peptide

n[145]ADLEMHIENLKEELAYLK

Peptide Length

18

ORF Length

205

Open Reading Frame (ORF)

LLVGGEKATMQNLNDRLASYLDKVRALEEADTELEVKIRDWYQRQAPGPARDYSQYYRIIEELQNKILTATVDNANILLHIDNAHLAAADFRTKFETEQALCLSVEADINGPCRVLDELTLARADLEMHIENLKEELAYLKKNHEVRWLGQKVKDAEEWVAEPWGWAMAEAVGESRAGALGLVTLEGFPVCGALILGVQRAGQTP

Conservation Score

1

PhyloCSF Frame 1

11.17

No. of Spectra

1

CPC Coding Probability

0.201615

PhyloCSF Frame 2 

9.658

CNTI Index

coding

Max Probability

0.1694

PhyloCSF Frame 3

9.471

CNTI Score

0.795310644