McDonnell Genome Institute

Washington University

Transcript

lnc-TMEM88B-2:10

Chromosome

chr1

Gene Name

lnc-TMEM88B-2

Start

1421722

CPC Label

coding

End

1423769

Cancer

EOGC

Strand

+

Peptide

EARSSGGWVESPVLIRAR

Modified Peptide

n[145]EARSSGGWVESPVLIRAR

Peptide Length

18

ORF Length

101

Open Reading Frame (ORF)

LGPGRRREHGSLGWLQQPGPSSGCTGKKESSVRLTGKEARSSGGWVESPVLIRAREATETTSRQLPRGTAARMDLEEAPPKTPVSRVPPQWGQPQLPLQCL

Conservation Score

0.049

PhyloCSF Frame 1

0

No. of Spectra

1

CPC Coding Probability

0.556427

PhyloCSF Frame 2 

0

CNTI Index

noncoding

Max Probability

0.06

PhyloCSF Frame 3

0

CNTI Score

-0.337321993