McDonnell Genome Institute

Washington University

Transcript

lnc-TMEM53-1:1

Chromosome

chr1

Gene Name

lnc-TMEM53-1

Start

44498969

CPC Label

noncoding

End

44503333

Cancer

HCC

Strand

-

Peptide

GLNTLPLIN

Modified Peptide

n[230]GLNTLPLIN

Peptide Length

9

ORF Length

47

Open Reading Frame (ORF)

LAGSGEGDAQVVARRLLENGDRQPGTPPCTELQPLGRKGLNTLPLIN

Conservation Score

1

PhyloCSF Frame 1

-4.96

No. of Spectra

1

CPC Coding Probability

0.167959

PhyloCSF Frame 2 

-4.932

CNTI Index

noncoding

Max Probability

0.4779

PhyloCSF Frame 3

-2.049

CNTI Score

-0.331901049