McDonnell Genome Institute

Washington University

Transcript

lnc-TMEM250-2:6

Chromosome

chr9

Gene Name

lnc-TMEM250-2

Start

136108104

CPC Label

noncoding

End

136109424

Cancer

BRCA-Luminal B

Strand

-

Peptide

FFPTPVADALVK

Modified Peptide

n[145]FFPTPVADALVK

Peptide Length

12

ORF Length

256

Open Reading Frame (ORF)

MGTAGAKGLSGQQEGHAGPPSCQQHVDHGSRHGDGHSCRFLRILTTVPAECCMNIHMELNQAWAGGWHRERRRDRLGPGPSGHTLAGCGRKSPPAPARICLPRDGTGLGLLYGHRQKRPMSDMTSPLSDCPRPGSPDAGAGLLPERPREVHLRFNGGTAASEARQWVVRSLSSLGSAAEEDWPPRPRPGTGMLGGHGQSSREPLAPWACPQLSRRERFFPTPVADALVKGFAEREHMDFQFFPAGARRPAPSLSSL

Conservation Score

0.738

PhyloCSF Frame 1

0

No. of Spectra

2

CPC Coding Probability

0.194468

PhyloCSF Frame 2 

0

CNTI Index

noncoding

Max Probability

0.96

PhyloCSF Frame 3

0

CNTI Score

-0.329458522