McDonnell Genome Institute

Washington University

Transcript

lnc-TMEM242-4:1

Chromosome

chr6

Gene Name

lnc-TMEM242-4

Start

157365989

CPC Label

noncoding

End

157366923

Cancer

BRCA-Luminal B

Strand

-

Peptide

TGLAGLEIGVLVNNVGMSYEYPK

Modified Peptide

n[145]TGLAGLEIGVLVNNVGM[147]SYEYPK

Peptide Length

23

ORF Length

70

Open Reading Frame (ORF)

LLLTASEDIYDKIKTGLAGLEIGVLVNNVGMSYEYPKYFLDIPDLDNMIKKMININILSVCKMTQLVHLA

Conservation Score

1

PhyloCSF Frame 1

0

No. of Spectra

1

CPC Coding Probability

0.110278

PhyloCSF Frame 2 

0

CNTI Index

noncoding

Max Probability

0.7796

PhyloCSF Frame 3

0

CNTI Score

-0.352080933