The Maher Lab

McDonnell Genome Institute

Washington University

Transcript

lnc-TMEM106C-6:2

Chromosome

chr12

Gene Name

lnc-TMEM106C-6

Start

47768528

CPC Label

noncoding

End

47769648

Cancer

OV

Strand

+

Peptide

HTNVGVCCGALVVSGAGR

Modified Peptide

n[145]HTNVGVCCGALVVSGAGR

Peptide Length

18

ORF Length

68

Open Reading Frame (ORF)

LIPWHPFDCKEAGKCSSNLGGTVPRKRHTNVGVCCGALVVSGAGRENGCASCRGRSSVCPGLGWECTL

Conservation Score

0.487

PhyloCSF Frame 1

0

No. of Spectra

3

CPC Coding Probability

0.0348418

PhyloCSF Frame 2 

0

CNTI Index

noncoding

Max Probability

0.8945

PhyloCSF Frame 3

0

CNTI Score

-0.38912388