McDonnell Genome Institute

Washington University

Transcript

lnc-TMEM105-2:30

Chromosome

chr17

Gene Name

lnc-TMEM105-2

Start

81388184

CPC Label

coding

End

81393487

Cancer

OSCC

Strand

-

Peptide

APLADGAFPTLLR

Modified Peptide

n[145]APLADGAFPTLLR

Peptide Length

13

ORF Length

259

Open Reading Frame (ORF)

LGAIELGPWARSPAGGVWRRPPGSCRGLGRLEQRAAAPASVSGKRVPPGPGPAGAGGGCPLPAYTEDGRPGSGEMALEKGGEGKVPGPWAGTRRRGPAEPSGDGGGASWKRRASPSAGLTPWGPVSPGSGKWTRPEAPGPRRAPLADGAFPTLLRNRVPITASDEPVSGSGTFFKLIFKASFEFFNIGKYVYEKNLGCNKKNTVATRGVPEVALSSSHQGRCSTSNRPVGEREAPSPWESWSPLECVGRTAAGKAPQSP

Conservation Score

0.996

PhyloCSF Frame 1

0

No. of Spectra

2

CPC Coding Probability

0.762778

PhyloCSF Frame 2 

0

CNTI Index

noncoding

Max Probability

0.7697

PhyloCSF Frame 3

0

CNTI Score

-0.259616844