top of page
McDonnell Genome Institute
Washington University
Transcript
lnc-TLX3-2:1
Chromosome
chr5
Gene Name
lnc-TLX3-2
Start
171251865
CPC Label
noncoding
End
171252982
Cancer
BRCA-Luminal B
Strand
+
Peptide
AFSNTETLCSEYK
Modified Peptide
n[145]AFSNTETLCSEYK
Peptide Length
13
ORF Length
135
Open Reading Frame (ORF)
MSFLTTTCNKIPHEFLNYLLNTIADILQEERKQEKQNGRLPNGNINNENNNSTPDPMRVHEIFQGTLTNETRCLTCETMSSKDEDFLDLSVDVEQNTSITHCLRAFSNTETLCSEYKYYCEECRSKQEAHKRRKV
Conservation Score
1
PhyloCSF Frame 1
0
No. of Spectra
1
CPC Coding Probability
0.0978359
PhyloCSF Frame 2
0
CNTI Index
coding
Max Probability
0.5478
PhyloCSF Frame 3
0
CNTI Score
0.589731752
bottom of page