McDonnell Genome Institute

Washington University

Transcript

lnc-TLX3-2:1

Chromosome

chr5

Gene Name

lnc-TLX3-2

Start

171251865

CPC Label

noncoding

End

171252982

Cancer

BRCA-Luminal B

Strand

+

Peptide

AFSNTETLCSEYK

Modified Peptide

n[145]AFSNTETLCSEYK

Peptide Length

13

ORF Length

135

Open Reading Frame (ORF)

MSFLTTTCNKIPHEFLNYLLNTIADILQEERKQEKQNGRLPNGNINNENNNSTPDPMRVHEIFQGTLTNETRCLTCETMSSKDEDFLDLSVDVEQNTSITHCLRAFSNTETLCSEYKYYCEECRSKQEAHKRRKV

Conservation Score

1

PhyloCSF Frame 1

0

No. of Spectra

1

CPC Coding Probability

0.0978359

PhyloCSF Frame 2 

0

CNTI Index

coding

Max Probability

0.5478

PhyloCSF Frame 3

0

CNTI Score

0.589731752