McDonnell Genome Institute

Washington University

Transcript

lnc-TINCR-5:1

Chromosome

chr19

Gene Name

lnc-TINCR-5

Start

5509170

CPC Label

coding

End

5510380

Cancer

EOGC

Strand

-

Peptide

GFHHVGRVSLK

Modified Peptide

n[145]GFHHVGRVSLK

Peptide Length

11

ORF Length

225

Open Reading Frame (ORF)

MGFHHVGRVSLKLLTSNDPPTLVRSQSQCVGITGMSHRARPAGSSLAVSLPYRKVWNLLICKLNSHPPGPPHPQRGLALPEPAQIPLSCLSLCLSVFASVSLFVGTGETQESSAHGLVGIHKSFPQPEHRVMEGPPSHPLCSVETEVQRHKALFLFLFFFLFPFFFFFEMESRSVAQAGVQWRNLGSLQVLPPRFTPFSCLSLPSSWDYRCPPPSLANFFFFLYF

Conservation Score

0.373

PhyloCSF Frame 1

0

No. of Spectra

2

CPC Coding Probability

0.963697

PhyloCSF Frame 2 

0

CNTI Index

noncoding

Max Probability

0.1587

PhyloCSF Frame 3

0

CNTI Score

-0.390862755