McDonnell Genome Institute

Washington University

Transcript

lnc-TFEC-7:1

Chromosome

chr7

Gene Name

lnc-TFEC-7

Start

116209233

CPC Label

noncoding

End

116211511

Cancer

CCRC

Strand

-

Peptide

AANGSRAAPGR

Modified Peptide

n[230]AANGSRAAPGR

Peptide Length

11

ORF Length

123

Open Reading Frame (ORF)

LASGSAANTGNLRNSRGAAQQPLARRRRTSAAQSAAAGLRPGPGNKGGRAANGSRAAPGRRQSPSAARTFAARARRWQGERRGGVRGGALLGKLSDPDLVSEGILWASTGRLLKSWDPQPPSS

Conservation Score

1

PhyloCSF Frame 1

0.314

No. of Spectra

2

CPC Coding Probability

0.0659979

PhyloCSF Frame 2 

3.938

CNTI Index

noncoding

Max Probability

0.355

PhyloCSF Frame 3

-2.906

CNTI Score

-0.267119079