The Maher Lab

McDonnell Genome Institute

Washington University

Transcript

lnc-TFDP1-2:2

Chromosome

chr13

Gene Name

lnc-TFDP1-2

Start

113527259

CPC Label

noncoding

End

113530621

Cancer

EOGC

Strand

+

Peptide

LVAGGWGGWGR

Modified Peptide

n[145]LVAGGWGGWGR

Peptide Length

11

ORF Length

38

Open Reading Frame (ORF)

LVAGGWGGWGRWGGSADGYRVSFWDDESILTWIVVIVV

Conservation Score

0.011

PhyloCSF Frame 1

-3.716

No. of Spectra

50

CPC Coding Probability

0.0356054

PhyloCSF Frame 2 

-4.548

CNTI Index

noncoding

Max Probability

0.9975

PhyloCSF Frame 3

-5.44

CNTI Score

-0.346537873