The Maher Lab

McDonnell Genome Institute

Washington University

Transcript

lnc-TFAP2A-14:3

Chromosome

chr6

Gene Name

lnc-TFAP2A-14

Start

10339476

CPC Label

noncoding

End

10355422

Cancer

EOGC

Strand

-

Peptide

GQFSEMK

Modified Peptide

n[145]GQFSEM[147]K

Peptide Length

7

ORF Length

34

Open Reading Frame (ORF)

MGQFSEMKMIGRGDGLDWKIKSSVFIVLSDYIEY

Conservation Score

0.252

PhyloCSF Frame 1

-5.109

No. of Spectra

28

CPC Coding Probability

0.0474676

PhyloCSF Frame 2 

-4.475

CNTI Index

noncoding

Max Probability

0.9997

PhyloCSF Frame 3

-4.748

CNTI Score

-0.357265053