McDonnell Genome Institute

Washington University

Transcript

lnc-TEX29-3:1

Chromosome

chr13

Gene Name

lnc-TEX29-3

Start

111292519

CPC Label

noncoding

End

111295191

Cancer

BRCA-HER2-enriched

Strand

+

Peptide

SSQSPVLISGR

Modified Peptide

n[145]SSQSPVLISGR

Peptide Length

11

ORF Length

62

Open Reading Frame (ORF)

MAQETSGQLLIPNICSQVATELLTPLEDFVFSYQLVKIRTLRSSQSPVLISGRDGVYVCSAR

Conservation Score

0.056

PhyloCSF Frame 1

-2.702

No. of Spectra

6

CPC Coding Probability

0.0710372

PhyloCSF Frame 2 

-4.261

CNTI Index

noncoding

Max Probability

0.9961

PhyloCSF Frame 3

-2.992

CNTI Score

-0.353264235