McDonnell Genome Institute

Washington University

Transcript

lnc-TEKT2-1:2

Chromosome

chr1

Gene Name

lnc-TEKT2-1

Start

36060095

CPC Label

coding

End

36060737

Cancer

BRCA-Basal-like

Strand

+

Peptide

ALHEFAK

Modified Peptide

n[145]ALHEFAK

Peptide Length

7

ORF Length

138

Open Reading Frame (ORF)

MSREIKPDLPFSRNDWQRISVFKERVSAKHASDGSEVFRWIADQELETVCDSRNLMDLFRALHEFAKGSDFYEIQEANDFDTARICCSLPISNLILIFLPRSLTDNSAKFSFSIIKPELNVCLAYPLRCSSVEQAGCP

Conservation Score

1

PhyloCSF Frame 1

-4.763

No. of Spectra

1

CPC Coding Probability

0.944286

PhyloCSF Frame 2 

-3.598

CNTI Index

noncoding

Max Probability

0.1898

PhyloCSF Frame 3

-3.756

CNTI Score

-0.349062333