McDonnell Genome Institute

Washington University

Transcript

lnc-TDRP-2:1

Chromosome

chr8

Gene Name

lnc-TDRP-2

Start

486116

CPC Label

noncoding

End

488512

Cancer

BRCA-HER2-enriched

Strand

-

Peptide

LQVQPVDCTYLR

Modified Peptide

n[145]LQVQPVDCTYLR

Peptide Length

12

ORF Length

100

Open Reading Frame (ORF)

MLSSASDLSDLLFSSSSDLIELLWWLCQWLAVAISPHPAIGGLVRWHLVVASSPEGDGAGHRHLSLAAGLRTGLLLGKLQVQPVDCTYLRKSTTLLPENL

Conservation Score

0.335

PhyloCSF Frame 1

-3.487

No. of Spectra

6

CPC Coding Probability

0.189175

PhyloCSF Frame 2 

-3.205

CNTI Index

noncoding

Max Probability

0.903

PhyloCSF Frame 3

-2.843

CNTI Score

-0.288497952