McDonnell Genome Institute

Washington University

Transcript

lnc-TBL1XR1-17:1

Chromosome

chr3

Gene Name

lnc-TBL1XR1-17

Start

175718230

CPC Label

coding

End

175718670

Cancer

CCRC

Strand

-

Peptide

GVGDGTVSWDLEDDEDMTLTR

Modified Peptide

n[230]GVGDGTVSWDLEDDEDMTLTR

Peptide Length

21

ORF Length

107

Open Reading Frame (ORF)

MAATTGSGVKVPRNFRLLEKLEEGQKGVGDGTVSWDLEDDEDMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFLRFVTKINMNGVNSSNGVVDPRAYQC

Conservation Score

1

PhyloCSF Frame 1

-3.058

No. of Spectra

31

CPC Coding Probability

0.713204

PhyloCSF Frame 2 

-4.141

CNTI Index

noncoding

Max Probability

0.9942

PhyloCSF Frame 3

-2.963

CNTI Score

-0.359551452