McDonnell Genome Institute

Washington University

Transcript

lnc-TBC1D22A-4:12

Chromosome

chr22

Gene Name

lnc-TBC1D22A-4

Start

47631702

CPC Label

noncoding

End

47859342

Cancer

OSCC

Strand

+

Peptide

MWSNEICRFWINIHVRMLHAHK

Modified Peptide

n[145]M[147]WSNEICRFWINIHVRMLHAHK

Peptide Length

22

ORF Length

45

Open Reading Frame (ORF)

MWSNEICRFWINIHVRMLHAHKINNAEFRIPVAASGTGAQRQVLG

Conservation Score

0.008

PhyloCSF Frame 1

-5.003

No. of Spectra

17

CPC Coding Probability

0.493219

PhyloCSF Frame 2 

-4.661

CNTI Index

noncoding

Max Probability

0.8267

PhyloCSF Frame 3

-5.113

CNTI Score

-0.296752343