McDonnell Genome Institute

Washington University

Transcript

lnc-TARS-6:1

Chromosome

chr5

Gene Name

lnc-TARS-6

Start

33162159

CPC Label

noncoding

End

33162867

Cancer

BRCA-Basal-like

Strand

+

Peptide

MSHYVLPLGR

Modified Peptide

n[145]M[147]SHYVLPLGR

Peptide Length

10

ORF Length

95

Open Reading Frame (ORF)

MSHYVLPLGRKKGAKLTPEEEEILNKKRFKQIQKKYDERKKNAKISSLLEEQFQQGKLLACIASRPGQCGRADGYVLEGKGLEFYLRKIKARKGK

Conservation Score

1

PhyloCSF Frame 1

4.476

No. of Spectra

2

CPC Coding Probability

0.234218

PhyloCSF Frame 2 

0

CNTI Index

coding

Max Probability

0.5438

PhyloCSF Frame 3

0

CNTI Score

0.685278285