The Maher Lab

McDonnell Genome Institute

Washington University

Transcript

lnc-TAF4-4:1

Chromosome

chr20

Gene Name

lnc-TAF4-4

Start

61717505

CPC Label

coding

End

61719748

Cancer

BRCA-Basal-like

Strand

-

Peptide

AGLGFPRR

Modified Peptide

n[145]AGLGFPRR

Peptide Length

8

ORF Length

92

Open Reading Frame (ORF)

MPRRAGLGFPRRQSGVWKAGPLGQHIPFTLPWGRQQDPAAQSSGWVLTSPTPTVWVLPCLLWDQVSVATVKGRIPSQGTLPTEASIGRVLRM

Conservation Score

0.393

PhyloCSF Frame 1

0

No. of Spectra

7

CPC Coding Probability

0.689408

PhyloCSF Frame 2 

0

CNTI Index

noncoding

Max Probability

0.9998

PhyloCSF Frame 3

0

CNTI Score

-0.310188351