The Maher Lab

McDonnell Genome Institute

Washington University

Transcript

lnc-TAF3-1:8

Chromosome

chr10

Gene Name

lnc-TAF3-1

Start

8051230

CPC Label

noncoding

End

8054426

Cancer

CCRC

Strand

+

Peptide

RVHSGGLR

Modified Peptide

​

Peptide Length

8

ORF Length

45

Open Reading Frame (ORF)

LQQLKRVHSGGLRAQKARERGDNDNKIDADAPVKGISPLSDDSPS

Conservation Score

0.658

PhyloCSF Frame 1

-3.655

No. of Spectra

31

CPC Coding Probability

0.233031

PhyloCSF Frame 2 

-3.361

CNTI Index

noncoding

Max Probability

0.9944

PhyloCSF Frame 3

-2.241

CNTI Score

-0.281392292