The Maher Lab

McDonnell Genome Institute

Washington University

Transcript

lnc-TAF3-1:12

Chromosome

chr10

Gene Name

lnc-TAF3-1

Start

8053603

CPC Label

noncoding

End

8055553

Cancer

PRAD

Strand

+

Peptide

VAVESRPEAGVGVGADR

Modified Peptide

​

Peptide Length

17

ORF Length

50

Open Reading Frame (ORF)

LETREPGKVAVESRPEAGVGVGADRGLVSLTVGETPGAGVTRGGTPPPSG

Conservation Score

1

PhyloCSF Frame 1

-3.252

No. of Spectra

2

CPC Coding Probability

0.00372452

PhyloCSF Frame 2 

-2.401

CNTI Index

noncoding

Max Probability

0.9755

PhyloCSF Frame 3

-1.399

CNTI Score

-0.330895136