The Maher Lab

McDonnell Genome Institute

Washington University

Transcript

lnc-SYT13-2:2

Chromosome

chr11

Gene Name

lnc-SYT13-2

Start

45212478

CPC Label

noncoding

End

45235259

Cancer

PRAD

Strand

-

Peptide

LPLLAPAEMPEPHPGSLSASGTSDR

Modified Peptide

​

Peptide Length

25

ORF Length

36

Open Reading Frame (ORF)

LPLLAPAEMPEPHPGSLSASGTSDRHGWSARPWPGR

Conservation Score

1

PhyloCSF Frame 1

-2.664

No. of Spectra

4

CPC Coding Probability

0.127613

PhyloCSF Frame 2 

11.472

CNTI Index

noncoding

Max Probability

0.7008

PhyloCSF Frame 3

-5.124

CNTI Score

-0.288857365