McDonnell Genome Institute

Washington University

Transcript

lnc-SYT13-2:1

Chromosome

chr11

Gene Name

lnc-SYT13-2

Start

45146642

CPC Label

noncoding

End

45214738

Cancer

BRCA-Luminal A

Strand

-

Peptide

VGADAGEAGPRR

Modified Peptide

n[145]VGADAGEAGPRR

Peptide Length

12

ORF Length

54

Open Reading Frame (ORF)

LCFLFRDLVVRVGADAGEAGPRRGKVSAPASARRRRRLAAALLPCFDHHLISTG

Conservation Score

1

PhyloCSF Frame 1

0.996

No. of Spectra

1

CPC Coding Probability

0.129035

PhyloCSF Frame 2 

10.467

CNTI Index

noncoding

Max Probability

0.5609

PhyloCSF Frame 3

6.678

CNTI Score

-0.305783705