McDonnell Genome Institute

Washington University

Transcript

lnc-SUSD1-7:2

Chromosome

chr9

Gene Name

lnc-SUSD1-7

Start

111942478

CPC Label

noncoding

End

111952702

Cancer

OSCC

Strand

-

Peptide

LGDPGESNMHQGPAR

Modified Peptide

n[145]LGDPGESNM[147]HQGPAR

Peptide Length

15

ORF Length

52

Open Reading Frame (ORF)

LGDPGESNMHQGPARERPGIRNLEEVYFEEDLYEQVRKRVERQAGGVGWGLT

Conservation Score

0.751

PhyloCSF Frame 1

-3.397

No. of Spectra

2

CPC Coding Probability

0.0729962

PhyloCSF Frame 2 

-6.011

CNTI Index

noncoding

Max Probability

0.6962

PhyloCSF Frame 3

-4.456

CNTI Score

-0.323224028