McDonnell Genome Institute

Washington University

Transcript

lnc-SUMF2-10:1

Chromosome

chr7

Gene Name

lnc-SUMF2-10

Start

56288229

CPC Label

coding

End

56291425

Cancer

HCC

Strand

+

Peptide

LLYMLAEALLVSHGVPFAGDVSK

Modified Peptide

LLYM[147]LAEALLVSHGVPFAGDVSK

Peptide Length

23

ORF Length

332

Open Reading Frame (ORF)

LIDSWSKLIKNADIKNAQEALQAIETKVALMLQLLIHEEDDISPNIIGFCYYYLHIWKQLTVLLDQQKANVEAIMLAVMKKLTYDEEYNFENEGEDEAMFVEYRKQLKLLLDRLAQVSPELLVASVHSVFSSTLQDWQTTWFMEVEVAIRLLYMLAEALLVSHGVPFAGDVSKASALQDMMRILVTSRVSSYQHTSVTLEFFKNVVRYEKFFTVEPQHIPRVLMAFLDHRSLRHSSAKVRSRMAYLFSRFVKSLNKQMNPLTEDILNRIQDLLELSPPENGHQSLLGSDDQLFIYETAGVLTVNSEYLAERKQALVRNLLTPLMEKFKILLE

Conservation Score

1

PhyloCSF Frame 1

0

No. of Spectra

1

CPC Coding Probability

0.999999

PhyloCSF Frame 2 

0

CNTI Index

coding

Max Probability

0.0997

PhyloCSF Frame 3

0

CNTI Score

0.68698267