The Maher Lab

McDonnell Genome Institute

Washington University

Transcript

lnc-SUMF1-5:1

Chromosome

chr3

Gene Name

lnc-SUMF1-5

Start

5187171

CPC Label

noncoding

End

5188298

Cancer

OV

Strand

-

Peptide

AGAAGIILK

Modified Peptide

n[145]AGAAGIILK

Peptide Length

9

ORF Length

239

Open Reading Frame (ORF)

LGEGVSHVVVVAKDEHAPCQVAHLGTQLRREGAAVALLVLVRAAAPAAQHVAPVGWAAHPRPRTPRSLARALRCPGPRRLQPRRPGYPPRPAHGPRGGRRGAVGAPQTLEAEAERKALVEAHAGPQPEDEPQYSMEAKPEEHQPQDERSPLHGRAGAAGIILKRGGLPADHRTPRSPRSPARFPFKELPRDAPGTSPSSPTPRLSGGPARPHGRPPSGPGLARPGPGLAGRGPGLPPTQ

Conservation Score

1

PhyloCSF Frame 1

-0.118

No. of Spectra

1

CPC Coding Probability

0.145162

PhyloCSF Frame 2 

13.972

CNTI Index

noncoding

Max Probability

0.7006

PhyloCSF Frame 3

-0.532

CNTI Score

-0.238365002