McDonnell Genome Institute

Washington University

Transcript

lnc-STRADB-1:1

Chromosome

chr2

Gene Name

lnc-STRADB-1

Start

201507413

CPC Label

noncoding

End

201509694

Cancer

BRCA-Luminal A

Strand

+

Peptide

NYQENDEK

Modified Peptide

n[145]NYQENDEK

Peptide Length

8

ORF Length

43

Open Reading Frame (ORF)

MQPQLKSQSYRTCQDDSNTSSIRIYKNYQENDEKADMCVPCQY

Conservation Score

0.257

PhyloCSF Frame 1

0

No. of Spectra

8

CPC Coding Probability

0.0556223

PhyloCSF Frame 2 

0

CNTI Index

noncoding

Max Probability

0.9987

PhyloCSF Frame 3

0

CNTI Score

-0.450616649