The Maher Lab

McDonnell Genome Institute

Washington University

Transcript

lnc-STMND1-4:6

Chromosome

chr6

Gene Name

lnc-STMND1-4

Start

16761596

CPC Label

noncoding

End

16766750

Cancer

OV

Strand

+

Peptide

EQLAAAAAAQGSDFMGVGGTLWRAARR

Modified Peptide

n[145]EQLAAAAAAQGSDFM[147]GVGGTLWRAARR

Peptide Length

27

ORF Length

94

Open Reading Frame (ORF)

MEQLAAAAAAQGSDFMGVGGTLWRAARRAAQSTASAPRGGRPAPLTLRCAPPGEAGTFPKEWLGMGCGGGETRTGGQGSFQVWEGGGELGDEVI

Conservation Score

1

PhyloCSF Frame 1

-0.079

No. of Spectra

11

CPC Coding Probability

0.21342

PhyloCSF Frame 2 

-0.733

CNTI Index

coding

Max Probability

0.7887

PhyloCSF Frame 3

4.85

CNTI Score

0.639787901