McDonnell Genome Institute

Washington University

Transcript

lnc-STAU1-5:1

Chromosome

chr20

Gene Name

lnc-STAU1-5

Start

48797292

CPC Label

noncoding

End

48800696

Cancer

OV

Strand

-

Peptide

ALVPAAPAPSPRR

Modified Peptide

n[145]ALVPAAPAPSPRR

Peptide Length

13

ORF Length

133

Open Reading Frame (ORF)

LALSSTTSKSPKAPFMAGVCWPLAQRQIRVRSYLDGWRCPARERYWWPLISRALVPAAPAPSPRRTRVLSSWVSTQLAPLPCCGGTEARLPAGQPLCTPFSTYLKWGWKTLTHGVHRKPRPLQSLAVLLTKCM

Conservation Score

1

PhyloCSF Frame 1

-3.843

No. of Spectra

6

CPC Coding Probability

0.225921

PhyloCSF Frame 2 

-3.159

CNTI Index

noncoding

Max Probability

0.7064

PhyloCSF Frame 3

-2.83

CNTI Score

-0.340432296