McDonnell Genome Institute

Washington University

Transcript

lnc-ST8SIA4-3:5

Chromosome

chr5

Gene Name

lnc-ST8SIA4-3

Start

100376018

CPC Label

noncoding

End

100535243

Cancer

EOGC

Strand

-

Peptide

CHLDLLGLSDPPHSASQIAGTTDVR

Modified Peptide

n[145]CHLDLLGLSDPPHSASQIAGTTDVR

Peptide Length

25

ORF Length

149

Open Reading Frame (ORF)

LSAAGEGLQPALLAWRQHLLPQPLSLHGGDAADMLPSQGLTLLPRLEGSGAITARCHLDLLGLSDPPHSASQIAGTTDVRCLSRVNFNIFFPTSQSLALLPRLESSVAILAHCILYLLGSNSSPASPSRVAGITGSCHHAQIVFFFIFC

Conservation Score

1

PhyloCSF Frame 1

0

No. of Spectra

14

CPC Coding Probability

0.209372

PhyloCSF Frame 2 

0

CNTI Index

coding

Max Probability

0.8445

PhyloCSF Frame 3

0

CNTI Score

0.708136831