McDonnell Genome Institute

Washington University

Transcript

lnc-ST3GAL6-5:1

Chromosome

chr3

Gene Name

lnc-ST3GAL6-5

Start

98657739

CPC Label

noncoding

End

98658166

Cancer

BRCA-HER2-enriched

Strand

+

Peptide

TAKSSSSSNLK

Modified Peptide

n[145]TAKSSSSSNLK

Peptide Length

11

ORF Length

92

Open Reading Frame (ORF)

MATASPKSDTTNNHSGRLQLQVTVSSAKLKRRKNWFGTAIYTEVVVDEEIRKTAKSSSSSNLKWDEQLTVNVTPQTTLEFRVWSHHTLKADA

Conservation Score

1

PhyloCSF Frame 1

0

No. of Spectra

1

CPC Coding Probability

0.411705

PhyloCSF Frame 2 

0

CNTI Index

noncoding

Max Probability

0.0884

PhyloCSF Frame 3

0

CNTI Score

-0.431128128