The Maher Lab

McDonnell Genome Institute

Washington University

Transcript

lnc-ST3GAL4-55:17

Chromosome

chr11

Gene Name

lnc-ST3GAL4-55

Start

127109453

CPC Label

noncoding

End

127139719

Cancer

HCC

Strand

+

Peptide

LIEQQQLPSSR

Modified Peptide

n[230]LIEQQQLPSSR

Peptide Length

11

ORF Length

35

Open Reading Frame (ORF)

LIEQQQLPSSREPGEQTAEKQSSGNMLQEKDITKE

Conservation Score

0.843

PhyloCSF Frame 1

-4.749

No. of Spectra

11

CPC Coding Probability

0.0460528

PhyloCSF Frame 2 

-5.024

CNTI Index

noncoding

Max Probability

0.9967

PhyloCSF Frame 3

-4.182

CNTI Score

-0.392124201