The Maher Lab

McDonnell Genome Institute

Washington University

Transcript

lnc-ST18-4:2

Chromosome

chr8

Gene Name

lnc-ST18-4

Start

52403700

CPC Label

noncoding

End

52409945

Cancer

BRCA-Luminal B

Strand

-

Peptide

LLCCLDIMVATR

Modified Peptide

n[145]LLCCLDIMVATR

Peptide Length

12

ORF Length

92

Open Reading Frame (ORF)

MFTIFHCSWQGGNRSYSELIISVIYLVAKPKIKLLCCLDIMVATRRFTSNVRPEALSISDQVWYLLGGKSLVTDHQCFCSFYFIVCNLPRHD

Conservation Score

0.378

PhyloCSF Frame 1

-5.323

No. of Spectra

2

CPC Coding Probability

0.0787159

PhyloCSF Frame 2 

-4.857

CNTI Index

noncoding

Max Probability

0.7822

PhyloCSF Frame 3

-5.359

CNTI Score

-0.339808974