McDonnell Genome Institute

Washington University

Transcript

lnc-SSTR4-12:2

Chromosome

chr20

Gene Name

lnc-SSTR4-12

Start

23135960

CPC Label

noncoding

End

23138305

Cancer

BRCA-Luminal B

Strand

+

Peptide

LVGILLVRR

Modified Peptide

n[145]LVGILLVRR

Peptide Length

9

ORF Length

41

Open Reading Frame (ORF)

LVGILLVRRESAPGPDSTLEGLHQGVNSRGVAPQPSLETLP

Conservation Score

0.015

PhyloCSF Frame 1

-5.617

No. of Spectra

9

CPC Coding Probability

0.159106

PhyloCSF Frame 2 

-2.715

CNTI Index

noncoding

Max Probability

0.9999

PhyloCSF Frame 3

-4.493

CNTI Score

-0.310983906