The Maher Lab

McDonnell Genome Institute

Washington University

Transcript

lnc-SSPO-1:1

Chromosome

chr7

Gene Name

lnc-SSPO-1

Start

149773207

CPC Label

noncoding

End

149776041

Cancer

OV

Strand

+

Peptide

LLGGLLAR

Modified Peptide

n[145]LLGGLLAR

Peptide Length

8

ORF Length

306

Open Reading Frame (ORF)

LRGRVPREGARGRGGRSRGKVERERVGGWRGGVGGTRRGRVGGEPASRALPSLSRRCQPGVQRRAPAGGRPGGSVWETPAPPPFSTRIPPRSTQTRSPSPGVPRTRFETSRGSRGGRRERGLGPCACENGSFEVETGERTLSQVPWEKAGPGRELQGARLGRGWAEILRAGSGGGSGRGLQRGEGSMGGRRLLGGLLARTPPGVRCGGQPSALSPQPQLLRGLHSPSLPRLRGFSLALFPLRPLLKAPEMLKSGLLVPGLLSMNFLQTPGFQLPPFCPFTGKGDCNSGLFPIPVLPDQPRFESRAE

Conservation Score

1

PhyloCSF Frame 1

0

No. of Spectra

7

CPC Coding Probability

0.145677

PhyloCSF Frame 2 

0

CNTI Index

noncoding

Max Probability

0.9723

PhyloCSF Frame 3

0

CNTI Score

-0.303652591