McDonnell Genome Institute
Transcript
lnc-SRBD1-1:1
Chromosome
chr2
Gene Name
lnc-SRBD1-1
Start
45648742
CPC Label
coding
End
45650825
Cancer
BRCA-Luminal B
Strand
-
Peptide
GLGTLPLPTPTR
Modified Peptide
n[145]GLGTLPLPTPTR
Peptide Length
12
ORF Length
286
Open Reading Frame (ORF)
MGEWRGPCCPRGLGTLPLPTPTRAAAGRSSLRSSGPSVTLSRDAVIHGGGGGGRGRDKHGSGEVLNSVLLSCLSLGTFSPLGSVLDFAGCENLLTSESSVEPRLGLWSAYFLQSDCSCLRWSLSVPLWGTSALISALTAAVRAAGKWGAPSGGRVAVSLLISSVTFKLSLEATAAAGHVRRALGCWGKISSAGSRDRAGGRRGTAPRPRLGTWEGRAGALGPGARPSWDTREDGGGEEVGSAAGELGIMQMGKENLRPRPSAKSSLGICRYCGHVMEGSGKYGLIF
Conservation Score
1
PhyloCSF Frame 1
-0.558
No. of Spectra
66
CPC Coding Probability
0.989128
PhyloCSF Frame 2
0.398
CNTI Index
noncoding
Max Probability
0.9979
PhyloCSF Frame 3
2.64
CNTI Score
-0.311987855