The Maher Lab

McDonnell Genome Institute

Washington University

Transcript

lnc-SPTSSA-2:1

Chromosome

chr14

Gene Name

lnc-SPTSSA-2

Start

34416686

CPC Label

coding

End

34417602

Cancer

BRCA-HER2-enriched

Strand

-

Peptide

EGHFLHK

Modified Peptide

n[145]EGHFLHK

Peptide Length

7

ORF Length

41

Open Reading Frame (ORF)

MEATFENMKDDPLANYANLLNIRIRRKSKEGHFLHKNTIGD

Conservation Score

1

PhyloCSF Frame 1

0

No. of Spectra

4

CPC Coding Probability

0.944589

PhyloCSF Frame 2 

0

CNTI Index

noncoding

Max Probability

0.9967

PhyloCSF Frame 3

0

CNTI Score

-0.366812862