The Maher Lab

McDonnell Genome Institute

Washington University

Transcript

lnc-SPOPL-12:1

Chromosome

chr2

Gene Name

lnc-SPOPL-12

Start

138897150

CPC Label

noncoding

End

138898098

Cancer

OSCC

Strand

+

Peptide

LSVSMWYSDENK

Modified Peptide

n[145]LSVSMWYSDENK

Peptide Length

12

ORF Length

76

Open Reading Frame (ORF)

MGNQILILVPELASGDHHHHLEQALVTIVGAGKGGCGTILGNKKWGQKRVQIRNLEGKLSVSMWYSDENKKTLTIK

Conservation Score

1

PhyloCSF Frame 1

0

No. of Spectra

4

CPC Coding Probability

0.309883

PhyloCSF Frame 2 

0

CNTI Index

noncoding

Max Probability

0.9323

PhyloCSF Frame 3

0

CNTI Score

-0.299304536