McDonnell Genome Institute

Washington University

Transcript

lnc-SPON1-4:1

Chromosome

chr11

Gene Name

lnc-SPON1-4

Start

14440786

CPC Label

noncoding

End

14441677

Cancer

BRCA-Luminal B

Strand

+

Peptide

FAYLGHLAHEVGWK

Modified Peptide

n[145]FAYLGHLAHEVGWK

Peptide Length

14

ORF Length

86

Open Reading Frame (ORF)

MVVPAALKVVCLKPTKKFAYLGHLAHEVGWKYQAVTATLEEKRKEKAKTHYWKKKQLTRLRKLAEKNVEKKIDKYTEVLQTHGLLV

Conservation Score

1

PhyloCSF Frame 1

0

No. of Spectra

1

CPC Coding Probability

0.120756

PhyloCSF Frame 2 

0

CNTI Index

coding

Max Probability

0.8072

PhyloCSF Frame 3

0

CNTI Score

0.704190976