The Maher Lab

McDonnell Genome Institute

Washington University

Transcript

lnc-SPNS3-1:10

Chromosome

chr17

Gene Name

lnc-SPNS3-1

Start

4159800

CPC Label

noncoding

End

4160702

Cancer

PRAD

Strand

+

Peptide

MYPYIHMTELCTPIIHDCPYPYIHMTQR

Modified Peptide

MYPYIHMTELCTPIIHDCPYPYIHM[147]TQR

Peptide Length

28

ORF Length

34

Open Reading Frame (ORF)

MYPYIHMTELCTPIIHDCPYPYIHMTQRRTPIST

Conservation Score

0.515

PhyloCSF Frame 1

0

No. of Spectra

3

CPC Coding Probability

0.120253

PhyloCSF Frame 2 

0

CNTI Index

noncoding

Max Probability

0.968

PhyloCSF Frame 3

0

CNTI Score

-0.337655358