The Maher Lab

McDonnell Genome Institute

Washington University

Transcript

lnc-SPINK9-1:1

Chromosome

chr5

Gene Name

lnc-SPINK9-1

Start

148430158

CPC Label

noncoding

End

148430807

Cancer

PRAD

Strand

+

Peptide

LPGSSDSPASASPVAGITSTCHHA

Modified Peptide

LPGSSDSPASASPVAGITSTCHHA

Peptide Length

24

ORF Length

48

Open Reading Frame (ORF)

LRRILAVSARLECSDTILAHCSLRLPGSSDSPASASPVAGITSTCHHA

Conservation Score

0.046

PhyloCSF Frame 1

0

No. of Spectra

8

CPC Coding Probability

0.0101746

PhyloCSF Frame 2 

0

CNTI Index

noncoding

Max Probability

0.4903

PhyloCSF Frame 3

0

CNTI Score

-0.402677952