McDonnell Genome Institute

Washington University

Transcript

lnc-SPATA8-1:1

Chromosome

chr15

Gene Name

lnc-SPATA8-1

Start

96756986

CPC Label

coding

End

96758596

Cancer

PRAD

Strand

+

Peptide

NNLLPPTSTAEVELVSTVGPQR

Modified Peptide

Peptide Length

22

ORF Length

141

Open Reading Frame (ORF)

LAKSSCGVFSTSSLSYTVQSTKRRNPSPRTLHPISTSHSRAGIPRLVEEILRGARVPAAANWLSSPSPMSLSRNNLLPPTSTAEVELVSTVGPQRQTEPRGDSSRAPSVVVDELNYQQPQERLLLPNFFSRPNTTQSFLVE

Conservation Score

1

PhyloCSF Frame 1

0

No. of Spectra

3

CPC Coding Probability

1

PhyloCSF Frame 2 

0

CNTI Index

coding

Max Probability

0.2024

PhyloCSF Frame 3

0

CNTI Score

0.672435567