McDonnell Genome Institute
Transcript
lnc-SPATA32-2:1
Chromosome
chr17
Gene Name
lnc-SPATA32-2
Start
45214009
CPC Label
noncoding
End
45222849
Cancer
CCRC
Strand
-
Peptide
GALGSAAR
Modified Peptide
n[230]GALGSAAR
Peptide Length
8
ORF Length
379
Open Reading Frame (ORF)
LKKRPLSLPPPGGGSCRTGDLQAAPESPGAGTRAQPLPRPCRPPPAPDPPPGRTHQGAVEPLLQLSGRGHRLLGRRGLLGGRRGGARGLLGAAGRVAHGGPHPAGQAPPASEIQLSGGRGRGSRPGRGRGGSGWRWRRGSRQRGALGSAARRGRSAASHRGGPVRGTGRRAAGLGEEVRLQAAGARGLGRGQEAAALAPPSAIFELLLSLPVRANRSSPPPPPGTQPQGGGLEGGGGRWPGDPRNHGGRGVGCRAASPAAEGAAGAASPAGAGGHRGEAEAAARSAAPPGPRTASSRSPRARDWPGLGEGDHGLGIGGAHLLRTEDLSDCEHGSETHGGAALGRQGCVPVSRPGLRRWEPPSRPPTFYFSPPLLSPETS
Conservation Score
1
PhyloCSF Frame 1
5.157
No. of Spectra
3
CPC Coding Probability
0.450895
PhyloCSF Frame 2
11.256
CNTI Index
noncoding
Max Probability
0.9956
PhyloCSF Frame 3
0.583
CNTI Score
-0.239874832